Data Visualizations to Detect Systematic Errors in Laboratory Assay Results
DOI:
https://doi.org/10.70705/ppp.dsei.2024.v02.i02.pp149Keywords:
Data quality check, Data science, R programming languageAbstract
The measurement of concentrations of drugs and endogenous substances is widely used in basic and clinical pharmacology
research and service tasks. Using data science-derived visualizations of laboratory data, it is demonstrated on a real-life example
that basic statistical exploration of laboratory assay results or advised stan- dard visual methods of data inspection may fall
short in detecting systematic labora- tory errors. For example, data pathologies such as generating always the same value in all
probes of a particular assay run may pass undetected when using standard methods of data quality check. It is shown that the
use of different data visualiza- tions that emphasize different views of the data may enhance the detection of sys- tematic laboratory
errors. A dotplot of single data in the order of assay is proposed that provides an overview on the data range, outliers
and a particular type of sys- tematic errors where similar values are wrongly measured in all probes.