Data Visualizations to Detect Systematic Errors in Laboratory Assay Results

Authors

  • Jo€rn Lo€tsch Author

DOI:

https://doi.org/10.70705/ppp.dsei.2024.v02.i02.pp149

Keywords:

Data quality check, Data science, R programming language

Abstract

The measurement of concentrations of drugs and endogenous substances is widely used in basic and clinical pharmacology
research and service tasks. Using data science-derived visualizations of laboratory data, it is demonstrated on a real-life example
that basic statistical exploration of laboratory assay results or advised stan- dard visual methods of data inspection may fall
short in detecting systematic labora- tory errors. For example, data pathologies such as generating always the same value in all
probes of a particular assay run may pass undetected when using standard methods of data quality check. It is shown that the
use of different data visualiza- tions that emphasize different views of the data may enhance the detection of sys- tematic laboratory
errors. A dotplot of single data in the order of assay is proposed that provides an overview on the data range, outliers
and a particular type of sys- tematic errors where similar values are wrongly measured in all probes.

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Published

2024-09-20

How to Cite

Data Visualizations to Detect Systematic Errors in Laboratory Assay Results. (2024). Data Science - Extracting Insights, 2(2), 150. https://doi.org/10.70705/ppp.dsei.2024.v02.i02.pp149